source("http://bioconductor.org/biocLite.R")
biocLite("RIPSeekerData")

RIPSeekerData

test data for RIPSeeker

Bioconductor version: 2.13

The RIP-seq data in BAM format are the test data for the package RIPSeeker. The data correspond to two RIP-seq experiments, namely PRC2 and CCNT1. Raw data from NCBI Gene Expression Omnibus under accession numbers GSE17064 for PRC2 and in-house for CCNT1.

Author: Yue Li

Maintainer: Alejandro Reyes <reyes at embl.de>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("RIPSeekerData")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("RIPSeekerData")

 

PDF	R Script	RIP-seq datasets for testing RIPSeeker package
PDF		Reference Manual

Details

biocViews	ExperimentData, RIPseqData
Version	0.99.3
License	GPL-2
Depends	RIPSeeker
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	RIPSeekerData_0.99.3.tar.gz
Windows Binary	RIPSeekerData_0.99.3.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	RIPSeekerData_0.99.3.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats