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ALLMLL
A subset of arrays from a large acute lymphoblastic leukemia (ALL) study
Bioconductor version: 2.13
This package provides probe-level data for 20 HGU133A and 20 HGU133B arrays which are a subset of arrays from a large ALL study. The data is for the MLL arrays. This data was published in Mary E. Ross, Xiaodong Zhou, Guangchun Song, Sheila A. Shurtleff, Kevin Girtman, W. Kent Williams, Hsi-Che Liu, Rami Mahfouz, Susana C. Raimondi, Noel Lenny, Anami Patel, and James R. Downing (2003) Classification of pediatric acute lymphoblastic leukemia by gene expression profiling Blood 102: 2951-2959
Author: B. M. Bolstad Maintainer: B. M. Bolstad <bmb at bmbolstad.com> Citation (from within R,
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source("http://bioconductor.org/biocLite.R")
biocLite("ALLMLL")
Documentation
browseVignettes("ALLMLL")
PDF
Reference Manual
Details
biocViews
Cancer, ExperimentData, Leukemia
Version
1.2.15
License
GPL-2
Depends
R (>= 2.10), affy(>= 1.23.4)
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me
arrayQualityMetrics, pvac
Package Archives
Package Source
ALLMLL_1.2.15.tar.gz
Windows Binary
ALLMLL_1.2.15.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)
ALLMLL_1.2.15.tgz
Browse/checkout source
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Package Downloads Report
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Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Counting Reads for Differential Expression (parathyroideSE vignette)
- Annotation
- Annotating Variants
- Annotating Ranges
- Flow Cytometry and other assays
- Candidate Binding Sites for Known Transcription Factors
- Cloud-enabled cis-eQTL search and annotation
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