To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Drerio.UCSC.danRer5")

In most cases, you don't need to download the package archive at all.

BSgenome.Drerio.UCSC.danRer5

Danio rerio (Zebrafish) full genome (UCSC version danRer5)

Bioconductor version: 2.13

Danio rerio (Zebrafish) full genome as provided by UCSC (danRer5, Jul. 2007) and stored in Biostrings objects.

Author: H. Pages

Maintainer: Biocore Team c/o BioC user list <bioconductor at stat.math.ethz.ch>

Citation (from within R, enter citation("BSgenome.Drerio.UCSC.danRer5")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BSgenome.Drerio.UCSC.danRer5")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BSgenome.Drerio.UCSC.danRer5")

 

PDF   Reference Manual

Details

biocViews AnnotationData, Danio_rerio, Genetics
Version 1.3.17
License Artistic-2.0
Depends BSgenome(>= 1.19.2)
Imports BSgenome
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BSgenome.Drerio.UCSC.danRer5_1.3.17.tar.gz
Windows Binary BSgenome.Drerio.UCSC.danRer5_1.3.17.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BSgenome.Drerio.UCSC.danRer5_1.3.17.tgz
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