Illumina HumanWG6v1 annotation data (chip illuminaHumanv1)


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Documentation for package ‘illuminaHumanv1.db’ version 1.20.0

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illuminaHumanv1 Bioconductor annotation data package
illuminaHumanv1.db Bioconductor annotation data package
illuminaHumanv1ACCNUM Map Manufacturer identifiers to Accession Numbers
illuminaHumanv1ALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
illuminaHumanv1ARRAYADDRESS Custom mappings added to the package
illuminaHumanv1CHR Map Manufacturer IDs to Chromosomes
illuminaHumanv1CHRLENGTHS A named vector for the length of each of the chromosomes
illuminaHumanv1CHRLOC Map Manufacturer IDs to Chromosomal Location
illuminaHumanv1CHRLOCEND Map Manufacturer IDs to Chromosomal Location
illuminaHumanv1CODINGZONE Custom mappings added to the package
illuminaHumanv1ENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
illuminaHumanv1ENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
illuminaHumanv1ENSEMBLREANNOTATED Custom mappings added to the package
illuminaHumanv1ENTREZID Map between Manufacturer Identifiers and Entrez Gene
illuminaHumanv1ENTREZREANNOTATED Custom mappings added to the package
illuminaHumanv1ENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
illuminaHumanv1ENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
illuminaHumanv1fullReannotation Custom mappings added to the package
illuminaHumanv1GENENAME Map between Manufacturer IDs and Genes
illuminaHumanv1GENOMICLOCATION Custom mappings added to the package
illuminaHumanv1GENOMICMATCHSIMILARITY Custom mappings added to the package
illuminaHumanv1GO Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaHumanv1GO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaHumanv1GO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaHumanv1listNewMappings Custom mappings added to the package
illuminaHumanv1LOCUSID Map between Manufacturer Identifiers and Entrez Gene
illuminaHumanv1MAP Map between Manufacturer Identifiers and cytogenetic maps/bands
illuminaHumanv1MAPCOUNTS Number of mapped keys for the maps in package illuminaHumanv1.db
illuminaHumanv1NUID Custom mappings added to the package
illuminaHumanv1OMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
illuminaHumanv1ORGANISM The Organism information for illuminaHumanv1
illuminaHumanv1ORGPKG The Organism information for illuminaHumanv1
illuminaHumanv1OTHERGENOMICMATCHES Custom mappings added to the package
illuminaHumanv1OVERLAPPINGSNP Custom mappings added to the package
illuminaHumanv1PATH Mappings between probe identifiers and KEGG pathway identifiers
illuminaHumanv1PATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
illuminaHumanv1PFAM Map Manufacturer IDs to Pfam IDs
illuminaHumanv1PMID Maps between Manufacturer Identifiers and PubMed Identifiers
illuminaHumanv1PMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
illuminaHumanv1PROBEQUALITY Custom mappings added to the package
illuminaHumanv1PROBESEQUENCE Custom mappings added to the package
illuminaHumanv1PROSITE Map Manufacturer IDs to PROSITE ID
illuminaHumanv1REFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
illuminaHumanv1REPEATMASK Custom mappings added to the package
illuminaHumanv1REPORTERGROUPID Custom mappings added to the package
illuminaHumanv1REPORTERGROUPNAME Custom mappings added to the package
illuminaHumanv1SECONDMATCHES Custom mappings added to the package
illuminaHumanv1SECONDMATCHSIMILARITY Custom mappings added to the package
illuminaHumanv1SYMBOL Map between Manufacturer Identifiers and Gene Symbols
illuminaHumanv1SYMBOLREANNOTATED Custom mappings added to the package
illuminaHumanv1TRANSCRIPTOMICMATCHSIMILARITY Custom mappings added to the package
illuminaHumanv1UNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
illuminaHumanv1UNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
illuminaHumanv1UNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
illuminaHumanv1_dbconn Collect information about the package annotation DB
illuminaHumanv1_dbfile Collect information about the package annotation DB
illuminaHumanv1_dbInfo Collect information about the package annotation DB
illuminaHumanv1_dbschema Collect information about the package annotation DB