source("http://bioconductor.org/biocLite.R")
biocLite("nudge")

nudge

Normal Uniform Differential Gene Expression detection

Bioconductor version: 2.13

Package for normalizing microarray data in single and multiple replicate experiments and fitting a normal-uniform mixture to detect differentially expressed genes in the cases where the two samples are being compared directly or indirectly (via a common reference sample)

Author: N. Dean <nemad at stat.washington.edu> and A. E. Raftery <raftery at stat.washington.edu>

Maintainer: N. Dean <nemad at stat.washington.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("nudge")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("nudge")

 

PDF	R Script	nudge Overview
PDF		nvignplot1.pdf
PDF		nvignplot2.pdf
PDF		nvignplot3.pdf
PDF		nvignplot4.pdf
PDF		Reference Manual

Details

biocViews	DifferentialExpression, Microarray, Software, TwoChannel
Version	1.28.0
In Bioconductor since	BioC 1.8 (R-2.3)
License	GPL-2
Depends
Imports	stats
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	nudge_1.28.0.tar.gz
Windows Binary	nudge_1.28.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	nudge_1.28.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats