source("http://bioconductor.org/biocLite.R")
biocLite("methylMnM")

methylMnM

detect different methylation level (DMR)

Bioconductor version: 2.13

To give the exactly p-value and q-value of MeDIP-seq and MRE-seq data for different samples comparation.

Author: Yan Zhou, Bo Zhang, Nan Lin, BaoXue Zhang and Ting Wang

Maintainer: Yan Zhou<zhouy1016 at 163.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("methylMnM")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("methylMnM")

 

PDF	R Script	methylMnM
PDF		Reference Manual

Details

biocViews	DNAMethylation, Sequencing, Software
Version	1.0.0
In Bioconductor since	BioC 2.13 (R-3.0)
License	GPL-3
Depends	R (>= 2.12.1), edgeR, statmod
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	methylMnM_1.0.0.tar.gz
Windows Binary	methylMnM_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	methylMnM_1.0.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats