source("http://bioconductor.org/biocLite.R")
biocLite("metaArray")

metaArray

Integration of Microarray Data for Meta-analysis

Bioconductor version: 2.13

1) Data transformation for meta-analysis of microarray Data: Transformation of gene expression data to signed probability scale (MCMC/EM methods) 2) Combined differential expression on raw scale: Weighted Z-score after stabilizing mean-variance relation within platform

Author: Debashis Ghosh <ghoshd at psu.edu> Hyungwon Choi <hyung_won_choi at nuhs.edu.sg>

Maintainer: Hyungwon Choi <hyung_won_choi at nuhs.edu.sg>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("metaArray")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("metaArray")

 

PDF	R Script	metaArray Vignette
PDF		Reference Manual

Details

biocViews	Bioinformatics, DifferentialExpression, Microarray, Software
Version	1.40.0
In Bioconductor since	BioC 1.8 (R-2.3)
License	LGPL-2
Depends
Imports	Biobase, MergeMaid, graphics, stats
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	oneChannelGUI

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	metaArray_1.40.0.tar.gz
Windows Binary	metaArray_1.40.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	metaArray_1.40.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats