source("http://bioconductor.org/biocLite.R")
biocLite("logicFS")

logicFS

Identification of SNP Interactions

Bioconductor version: 2.13

Identification of interactions between binary variables using Logic Regression. Can, e.g., be used to find interesting SNP interactions. Contains also a bagging version of logic regression for classification.

Author: Holger Schwender

Maintainer: Holger Schwender <holger.schw at gmx.de>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("logicFS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("logicFS")

 

PDF	R Script	logicFS Manual
PDF		Reference Manual

Details

biocViews	Classification, Genetics, SNP, Software
Version	1.32.0
In Bioconductor since	BioC 1.8 (R-2.3)
License	LGPL (>= 2)
Depends	LogicReg, mcbiopi
Imports
Suggests	genefilter, siggenes
System Requirements
URL
Depends On Me
Imports Me
Suggests Me	trio

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	logicFS_1.32.0.tar.gz
Windows Binary	logicFS_1.32.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	logicFS_1.32.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats