source("http://bioconductor.org/biocLite.R")
biocLite("lmdme")

lmdme

Linear Model decomposition for Designed Multivariate Experiments

Bioconductor version: 2.13

linear ANOVA decomposition of Multivariate Designed Experiments implementation based on limma lmFit. Features: i)Flexible formula type interface, ii) Fast limma based implementation, iii) p-values for each estimated coefficient levels in each factor, iv) F values for factor effects and v) plotting functions for PCA and PLS.

Author: Cristobal Fresno and Elmer A. Fernandez

Maintainer: Cristobal Fresno <cristobalfresno at gmail.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("lmdme")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("lmdme")

 

PDF	R Script	lmdme: Linear Model on Designed Multivariate Experiments in R
PDF		Reference Manual
Text		NEWS

Details

biocViews	AssayDomains, Bioinformatics, Cancer, DifferentialExpression, ExperimentData, Microarray, OneChannel, Software, TwoChannel, Visualization
Version	1.4.0
In Bioconductor since	BioC 2.11 (R-2.15)
License	GPL (>=2)
Depends	R (>= 2.14.1), methods, limma, pls, stemHypoxia
Imports	stats
Suggests
System Requirements
URL	http://www.bdmg.com.ar/?page_id=38
Depends On Me
Imports Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	lmdme_1.4.0.tar.gz
Windows Binary	lmdme_1.4.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	lmdme_1.4.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats