source("http://bioconductor.org/biocLite.R")
biocLite("iASeq")

iASeq

iASeq: integrating multiple sequencing datasets for detecting allele-specific events

Bioconductor version: 2.13

It fits correlation motif model to multiple RNAseq or ChIPseq studies to improve detection of allele-specific events and describe correlation patterns across studies.

Author: Yingying Wei, Hongkai Ji

Maintainer: Yingying Wei <ywei at jhsph.edu>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("iASeq")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("iASeq")

 

PDF	R Script	iASeq Vignette
PDF		Reference Manual

Details

biocViews	Bioinformatics, ChIPseq, RNAseq, SNP, Software
Version	1.6.0
In Bioconductor since	BioC 2.10 (R-2.15)
License	GPL-2
Depends	R (>= 2.14.1)
Imports	graphics, grDevices
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	iASeq_1.6.0.tar.gz
Windows Binary	iASeq_1.6.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	iASeq_1.6.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats