source("http://bioconductor.org/biocLite.R")
biocLite("flowFlowJo")

flowFlowJo

Tools for extracting information from a FlowJo workspace and working with the data in the flowCore paradigm.

Bioconductor version: 2.13

FlowJo is a commercial GUI based software package from TreeStar Inc. for the visualization and analysis of flow cytometry data. One of the FlowJo standard export file types is the "FlowJo Workspace". This is an XML document that describes files and manipulations that have been performed in the FlowJo GUI environment. This package can take apart the FlowJo workspace and deliver the data into R in the flowCore paradigm.

Author: John J. Gosink <gosinkj at amgen.com>

Maintainer: John J. Gosink <gosinkj at amgen.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("flowFlowJo")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("flowFlowJo")

 

PDF	R Script	Basic Functions for working with FlowJo
PDF		Reference Manual

Details

biocViews	FlowCytometry, Software
Version	1.20.0
In Bioconductor since	BioC 2.4 (R-2.9)
License	GPL (>=3)
Depends	R (>= 2.5.0), MASS
Imports	flowCore, XML (>= 1.96), methods, Biobase
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Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	flowFlowJo_1.20.0.tar.gz
Windows Binary	flowFlowJo_1.20.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	flowFlowJo_1.20.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats