To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("cleaver")

In most cases, you don't need to download the package archive at all.

cleaver

Cleavage of polypeptide sequences

Bioconductor version: 2.13

In-silico cleavage of polypeptide sequences. The cleavage rules are taken from: http://web.expasy.org/peptide_cutter/peptidecutter_enzymes.html

Author: Sebastian Gibb [aut, cre]

Maintainer: Sebastian Gibb <mail at sebastiangibb.de>

Citation (from within R, enter citation("cleaver")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("cleaver")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cleaver")

 

PDF R Script in-silico cleavage of polypeptides
PDF   Reference Manual
Text   NEWS

Details

biocViews Bioinformatics, Proteomics, Software
Version 1.0.0
In Bioconductor since BioC 2.13 (R-3.0)
License GPL (>= 3)
Depends R (>= 3.0.0), methods, Biostrings(>= 1.29.8)
Imports IRanges
Suggests testthat, knitr, BiocStyle(>= 0.0.14), BRAIN, UniProt.ws(>= 2.1.4)
System Requirements
URL https://github.com/sgibb/cleaver/
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source cleaver_1.0.0.tar.gz
Windows Binary cleaver_1.0.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) cleaver_1.0.0.tgz
Browse/checkout source (username/password: readonly)
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center