source("http://bioconductor.org/biocLite.R")
biocLite("chopsticks")

chopsticks

The snp.matrix and X.snp.matrix classes

Bioconductor version: 2.13

Implements classes and methods for large-scale SNP association studies

Author: Hin-Tak Leung <htl10 at users.sourceforge.net>

Maintainer: Hin-Tak Leung <htl10 at users.sourceforge.net>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("chopsticks")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("chopsticks")

 

PDF		practical3_snpStatsBug-diff.pdf
PDF		practical6_snpStatsBug-diff.pdf
PDF		practical7_snpStatsBug-diff.pdf
PDF	R Script	snpMatrix
PDF		snpMatrix-4d.pdf
PDF		snpMatrix-paper-HumanHeridity2007.pdf
PDF		snpStatsBug-vignette.pdf
PDF		snpStatsBug_1.3.6_-vignette.pdf
PDF		snpStatsBug_1.5.4_-vignette.pdf
PDF		Reference Manual

Details

biocViews	GeneticVariability, Microarray, SNP, SNPsAndGeneticVariability, Software
Version	1.26.1
In Bioconductor since	BioC 2.8 (R-2.13)
License	GPL-3
Depends	R (>= 2.10.0), survival, methods
Imports
Suggests	hexbin
System Requirements
URL	http://outmodedbonsai.sourceforge.net/
Depends On Me	ind1KG
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	chopsticks_1.26.1.tar.gz
Windows Binary	chopsticks_1.26.1.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	chopsticks_1.26.1.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats