source("http://bioconductor.org/biocLite.R")
biocLite("cellHTS")

cellHTS

Analysis of cell-based screens

Bioconductor version: 2.13

Analysis of cell-based RNA interference screens

Author: Wolfgang Huber <huber at ebi.ac.uk>, Ligia Bras <ligia at ebi.ac.uk>, Michael Boutros <m.boutros at dkfz.de>

Maintainer: Ligia Bras <ligia at ebi.ac.uk>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("cellHTS")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("cellHTS")

 

PDF	R Script	Main vignette: End-to-end analysis of cell-based screens
PDF	R Script	Supplement: multi-channel assays
PDF	R Script	Supplement: two-way assays
PDF		Reference Manual

Details

biocViews	CellBasedAssays, Software, Visualization
Version	1.32.0
In Bioconductor since	BioC 1.8 (R-2.3)
License	Artistic-2.0
Depends	R (>= 2.10), prada(>= 1.9.4), RColorBrewer, Biobase(>= 1.11.12), genefilter(>= 1.11.2)
Imports
Suggests	Category, GO.db, vsn(>= 2.0.35)
System Requirements
URL	http://www.dkfz.de/signaling http://www.ebi.ac.uk/huber
Depends On Me
Imports Me
Suggests Me	prada

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	cellHTS_1.32.0.tar.gz
Windows Binary	cellHTS_1.32.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	cellHTS_1.32.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats