source("http://bioconductor.org/biocLite.R")
biocLite("SQUADD")

SQUADD

Add-on of the SQUAD Software

Bioconductor version: 2.13

This package SQUADD is a SQUAD add-on. It permits to generate SQUAD simulation matrix, prediction Heat-Map and Correlation Circle from PCA analysis.

Author: Martial Sankar, supervised by Christian Hardtke and Ioannis Xenarios

Maintainer: Martial Sankar <martial.sankar at unil.ch>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SQUADD")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SQUADD")

 

PDF	R Script	SQUADD package
PDF	R Script	SQUADD package
PDF		Reference Manual

Details

biocViews	GraphsAndNetworks, NetworkAnalysis, Software, Visualization
Version	1.12.0
In Bioconductor since	BioC 2.7 (R-2.12)
License	GPL (>=2)
Depends	R (>= 2.11.0)
Imports	graphics, grDevices, methods, RColorBrewer, stats, utils
Suggests
System Requirements
URL	http://www.unil.ch/dbmv/page21142_en.html
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	SQUADD_1.12.0.tar.gz
Windows Binary	SQUADD_1.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	SQUADD_1.12.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats