source("http://bioconductor.org/biocLite.R")
biocLite("SAGx")

SAGx

Statistical Analysis of the GeneChip

Bioconductor version: 2.13

A package for retrieval, preparation and analysis of data from the Affymetrix GeneChip. In particular the issue of identifying differentially expressed genes is addressed.

Author: Per Broberg

Maintainer: Per Broberg, <pi.broberg at gmail.com>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("SAGx")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("SAGx")

 

PDF	R Script	samroc - example
PDF		Reference Manual

Details

biocViews	Bioinformatics, Clustering, DataImport, DifferentialExpression, Microarray, MultipleComparisons, OneChannel, Preprocessing, Software
Version	1.36.0
In Bioconductor since	BioC 1.9 (R-2.4)
License	GPL-3
Depends	R (>= 2.5.0), stats, multtest, methods
Imports	Biobase, stats4
Suggests	KEGG.db, hu6800.db, MASS
System Requirements
URL	http://home.swipnet.se/pibroberg/expression_hemsida1.html
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	SAGx_1.36.0.tar.gz
Windows Binary	SAGx_1.36.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	SAGx_1.36.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats