To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BaseSpaceR")

In most cases, you don't need to download the package archive at all.

BaseSpaceR

R SDK for BaseSpace RESTful API

Bioconductor version: 2.13

A rich R interface to Illumina's BaseSpace cloud computing environment, enabling the fast development of data analysis and visualisation tools.

Author: Adrian Alexa

Maintainer: Adrian Alexa <aalexa at illumina.com>

Citation (from within R, enter citation("BaseSpaceR")):

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("BaseSpaceR")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("BaseSpaceR")

 

PDF R Script BaseSpaceR
PDF BaseSpaceR-QscoreApp.pdf
PDF   Reference Manual
Text   NEWS

Details

biocViews ConnectTools, DataImport, DataRepresentation, Genetics, HighThroughputSequencing, Infrastructure, Sequencing, Software
Version 1.2.0
In Bioconductor since BioC 2.12 (R-3.0)
License Apache License 2.0
Depends R (>= 2.15.0), RCurl, RJSONIO
Imports methods
Suggests RUnit
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source BaseSpaceR_1.2.0.tar.gz
Windows Binary BaseSpaceR_1.2.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) BaseSpaceR_1.2.0.tgz
Browse/checkout source (username/password: readonly)
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