source("http://bioconductor.org/biocLite.R")
biocLite("ArrayExpress")

ArrayExpress

Access the ArrayExpress Microarray Database at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Bioconductor version: 2.13

Access the ArrayExpress Repository at EBI and build Bioconductor data structures: ExpressionSet, AffyBatch, NChannelSet

Author: Audrey Kauffmann, Ibrahim Emam

Maintainer: Ibrahim Emam <iemam at ebi.ac.uk>

Installation

To install this package, start R and enter:

source("http://bioconductor.org/biocLite.R")
biocLite("ArrayExpress")

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ArrayExpress")

 

PDF	R Script	ArrayExpress: Import and convert ArrayExpress data sets into R object
PDF		Reference Manual

Details

biocViews	DataImport, Microarray, OneChannel, Software, TwoChannel
Version	1.22.0
In Bioconductor since	BioC 2.3 (R-2.8)
License	Artistic-2.0
Depends	R (>= 2.9.0), Biobase(>= 2.4.0)
Imports	XML, affy, limma
Suggests
System Requirements
URL
Depends On Me	DrugVsDisease
Imports Me
Suggests Me	gCMAPWeb, gCMAPWeb, Hiiragi2013

Package Archives

Follow Installation instructions to use this package in your R session.

Package Source	ArrayExpress_1.22.0.tar.gz
Windows Binary	ArrayExpress_1.22.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	ArrayExpress_1.22.0.tgz
Browse/checkout source	(username/password: readonly)
Package Downloads Report	Download Stats