Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi

Bioconductor version: Release (2.12)

This package includes all data used in the paper -Mapping of Signalling Networks through Synthetic Genetic Interaction Analysis by RNAi- by Horn, Sandmann, Fischer et al.., Nat. Methods, 2011. The package vignette shows the R code to reproduce all figures in the paper.

Author: Bernd Fischer <bernd.fischer at embl.de>

Maintainer: Bernd Fischer <bernd.fischer at embl.de>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script RNAinteractMAPK
PDF   Reference Manual


biocViews ExperimentData
Version 1.0.11
License Artistic-2.0
Depends R (>= 2.12.0), methods, fields, sparseLDA, RNAinteract
Imports grid, gdata, MASS, genefilter
Suggests qvalue, lattice
System Requirements
Depends On Me
Imports Me
Suggests Me

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Package Source RNAinteractMAPK_1.0.11.tar.gz
Windows Binary RNAinteractMAPK_1.0.11.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) RNAinteractMAPK_1.0.11.tgz
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