DREAM4

Synthetic Expression Data for Gene Regulatory Network Inference from the 2009 DREAM4 challenge

Bioconductor version: Release (2.12)

Simulated expression data for five 10-node, and five 100-node networks, with associated data (including solutions) from the 2009 DREAM4 challenge.

Author: Paul Shannon

Maintainer: Paul Shannon <pshannon at fhcrc.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("DREAM4")

To cite this package in a publication, start R and enter:

    citation("DREAM4")

Documentation

PDF R Script DREAM4 Overview
PDF DREAM4_InSilico_Description.pdf
PDF   Reference Manual

Details

biocViews ExperimentData, NetworkInference, RNAExpressionData
Version 0.99.17
License GPL
Depends R (>= 2.15.1), GenomicRanges
Imports BiocGenerics
Suggests RUnit, networkBMA
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source DREAM4_0.99.17.tar.gz
Windows Binary DREAM4_0.99.17.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) DREAM4_0.99.17.tgz
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