ConnectivityMap

Functional connections between drugs, genes and diseases as revealed by common gene-expression changes

Bioconductor version: Release (2.12)

The Broad Institute's Connectivity Map (cmap02) is a "large reference catalogue of gene-expression data from cultured human cells perturbed with many chemicals and genetic reagents", containing more than 7000 gene expression profiles and 1300 small molecules.

Author: Paul Shannon

Maintainer: Paul Shannon<pshannon at fhcrc.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("ConnectivityMap")

To cite this package in a publication, start R and enter:

    citation("ConnectivityMap")

Documentation

PDF   Reference Manual

Details

biocViews ExperimentData, GeneExpression, Microarray
Version 0.99.10
License GPL-3
Depends R (>= 2.15.1)
Imports
Suggests RUnit, BiocGenerics
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source ConnectivityMap_0.99.10.tar.gz
Windows Binary ConnectivityMap_0.99.10.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard) ConnectivityMap_0.99.10.tgz
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