RNA-seq count data employed in the vignette of the tweeDEseq package

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Documentation for package ‘tweeDEseqCountData’ version 1.0.9

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tweeDEseqCountData-package RNA-seq count data employed in the vignette of the tweeDEseq package
annotEnsembl63 Annotation data from Ensemble Release 63
cheung RNA-seq count data from Cheung et al. (2010)
cheung.eset RNA-seq count data from Cheung et al. (2010)
commonPickrell1Huang Matching microarray and RNA-seq data from human lymphoblastoid cell lines
cqnNormCommon Matching microarray and RNA-seq data from human lymphoblastoid cell lines
cqnNormCommonSamples Matching microarray and RNA-seq data from human lymphoblastoid cell lines
genderGenes Genes with documented sex-specific expression
hkGenes Housekeeping Genes from Eisenberg and Levanon (2003)
huangArrayRMAnoBatchCommon.eset Matching microarray and RNA-seq data from human lymphoblastoid cell lines
huangArrayRMAnoBatchCommonSamples.eset Matching microarray and RNA-seq data from human lymphoblastoid cell lines
montgomery RNA-seq count data from Montgomery et al. (2010)
montgomery.eset RNA-seq count data from Montgomery et al. (2010)
msYgenes Genes with documented sex-specific expression
pickrell RNA-seq count data from Pickrell et al. (2010)
pickrell.eset RNA-seq count data from Pickrell et al. (2010)
pickrell1 RNA-seq count data from Pickrell et al. (2010)
pickrell1.eset RNA-seq count data from Pickrell et al. (2010)
pickrell1countsCommon.eset Matching microarray and RNA-seq data from human lymphoblastoid cell lines
pickrell1countsCommonSamples.eset Matching microarray and RNA-seq data from human lymphoblastoid cell lines
pickrell1countsCQNcommon.eset Matching microarray and RNA-seq data from human lymphoblastoid cell lines
pickrell1countsCQNcommonSamples.eset Matching microarray and RNA-seq data from human lymphoblastoid cell lines
pickrell1Norm RNA-seq count data from Pickrell et al. (2010)
pickrell1Norm.eset RNA-seq count data from Pickrell et al. (2010)
pickrellNorm RNA-seq count data from Pickrell et al. (2010)
pickrellNorm.eset RNA-seq count data from Pickrell et al. (2010)
XiEgenes Genes with documented sex-specific expression