Illumina HumanHT12v4 annotation data (chip illuminaHumanv4)


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Documentation for package ‘illuminaHumanv4.db’ version 1.18.0

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illuminaHumanv4 Bioconductor annotation data package
illuminaHumanv4.db Bioconductor annotation data package
illuminaHumanv4ACCNUM Map Manufacturer identifiers to Accession Numbers
illuminaHumanv4ALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
illuminaHumanv4ARRAYADDRESS Custom mappings added to the package
illuminaHumanv4CHR Map Manufacturer IDs to Chromosomes
illuminaHumanv4CHRLENGTHS A named vector for the length of each of the chromosomes
illuminaHumanv4CHRLOC Map Manufacturer IDs to Chromosomal Location
illuminaHumanv4CHRLOCEND Map Manufacturer IDs to Chromosomal Location
illuminaHumanv4CODINGZONE Custom mappings added to the package
illuminaHumanv4ENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
illuminaHumanv4ENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
illuminaHumanv4ENSEMBLREANNOTATED Custom mappings added to the package
illuminaHumanv4ENTREZID Map between Manufacturer Identifiers and Entrez Gene
illuminaHumanv4ENTREZREANNOTATED Custom mappings added to the package
illuminaHumanv4ENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
illuminaHumanv4ENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
illuminaHumanv4fullReannotation Custom mappings added to the package
illuminaHumanv4GENENAME Map between Manufacturer IDs and Genes
illuminaHumanv4GENOMICLOCATION Custom mappings added to the package
illuminaHumanv4GENOMICMATCHSIMILARITY Custom mappings added to the package
illuminaHumanv4GO Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaHumanv4GO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaHumanv4GO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaHumanv4listNewMappings Custom mappings added to the package
illuminaHumanv4LOCUSID Map between Manufacturer Identifiers and Entrez Gene
illuminaHumanv4MAP Map between Manufacturer Identifiers and cytogenetic maps/bands
illuminaHumanv4MAPCOUNTS Number of mapped keys for the maps in package illuminaHumanv4.db
illuminaHumanv4NUID Custom mappings added to the package
illuminaHumanv4OMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
illuminaHumanv4ORGANISM The Organism information for illuminaHumanv4
illuminaHumanv4ORGPKG The Organism information for illuminaHumanv4
illuminaHumanv4OTHERGENOMICMATCHES Custom mappings added to the package
illuminaHumanv4OVERLAPPINGSNP Custom mappings added to the package
illuminaHumanv4PATH Mappings between probe identifiers and KEGG pathway identifiers
illuminaHumanv4PATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
illuminaHumanv4PFAM Map Manufacturer IDs to Pfam IDs
illuminaHumanv4PMID Maps between Manufacturer Identifiers and PubMed Identifiers
illuminaHumanv4PMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
illuminaHumanv4PROBEQUALITY Custom mappings added to the package
illuminaHumanv4PROBESEQUENCE Custom mappings added to the package
illuminaHumanv4PROSITE Map Manufacturer IDs to PROSITE ID
illuminaHumanv4REFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
illuminaHumanv4REPEATMASK Custom mappings added to the package
illuminaHumanv4REPORTERGROUPID Custom mappings added to the package
illuminaHumanv4REPORTERGROUPNAME Custom mappings added to the package
illuminaHumanv4SECONDMATCHES Custom mappings added to the package
illuminaHumanv4SECONDMATCHSIMILARITY Custom mappings added to the package
illuminaHumanv4SYMBOL Map between Manufacturer Identifiers and Gene Symbols
illuminaHumanv4SYMBOLREANNOTATED Custom mappings added to the package
illuminaHumanv4TRANSCRIPTOMICMATCHSIMILARITY Custom mappings added to the package
illuminaHumanv4UNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
illuminaHumanv4UNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
illuminaHumanv4UNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
illuminaHumanv4_dbconn Collect information about the package annotation DB
illuminaHumanv4_dbfile Collect information about the package annotation DB
illuminaHumanv4_dbInfo Collect information about the package annotation DB
illuminaHumanv4_dbschema Collect information about the package annotation DB