Bioconductor version: Release (2.12)
Robust estimation of cDNA microarray intensities with replicates. The package uses a Bayesian hierarchical model for the robust estimation. Outliers are modeled explicitly using a t-distribution, and the model also addresses classical issues such as design effects, normalization, transformation, and nonconstant variance.
Author: Raphael Gottardo
Maintainer: Raphael Gottardo <raph at stat.ubc.ca>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("rama")
To cite this package in a publication, start R and enter:
citation("rama")
R Script | rama Tutorial | |
Reference Manual |
biocViews | Microarray, Preprocessing, QualityControl, Software, TwoChannel |
Version | 1.34.0 |
In Bioconductor since | BioC 1.6 (R-1.11) or earlier |
License | GPL (>= 2) |
Depends | R(>= 2.5.0) |
Imports | |
Suggests | |
System Requirements | |
URL | |
Depends On Me | bridge |
Imports Me | |
Suggests Me |
Package Source | rama_1.34.0.tar.gz |
Windows Binary | rama_1.34.0.zip (32- & 64-bit) |
Mac OS X 10.6 (Snow Leopard) | rama_1.34.0.tgz |
Package Downloads Report | Download Stats |
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