netresponse

NetResponse: functional network analysis

Bioconductor version: Release (2.12)

Algorithms for functional network analysis. Includes an implementation of a variational Dirichlet process Gaussian mixture model for nonparametric mixture modeling.

Author: Leo Lahti, Olli-Pekka Huovilainen, Antonio Gusmao and Juuso Parkkinen

Maintainer: Leo Lahti <leo.lahti at iki.fi>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("netresponse")

To cite this package in a publication, start R and enter:

    citation("netresponse")

Documentation

PDF	R Script	netresponse
PDF		Reference Manual
Text		NEWS
Text		LICENSE

Details

biocViews	CellBiology, Clustering, DifferentialExpression, GeneExpression, Genetics, GraphsAndNetworks, Microarray, NetworkAnalysis, Software, Transcription
Version	1.12.0
In Bioconductor since	BioC 2.7 (R-2.12)
License	GPL (>=2)
Depends	R (>= 2.15.1), dmt, igraph0, infotheo, ggplot2, graph, mclust, methods, minet, parallel, qvalue, RColorBrewer, reshape, Rgraphviz
Imports
Suggests
System Requirements
URL	http://netpro.r-forge.r-project.org/
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source	netresponse_1.12.0.tar.gz
Windows Binary	netresponse_1.12.0.zip (32- & 64-bit)
Mac OS X 10.6 (Snow Leopard)	netresponse_1.12.0.tgz
Package Downloads Report	Download Stats

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