motifRG

A package for discriminative motif discovery, designed for high throughput sequencing dataset

Bioconductor version: Release (2.12)

Tools for discriminative motif discovery using regression methods

Author: Zizhen Yao

Maintainer: Zizhen Yao <yzizhen at fhcrc.org>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("motifRG")

To cite this package in a publication, start R and enter:

    citation("motifRG")

PDF	R Script	motifRG: regression-based discriminative motif discovery
PDF		Reference Manual

biocViews	MotifDiscovery, Software, Transcription
Version	1.4.0
In Bioconductor since	BioC 2.10 (R-2.15)
License	Artistic-2.0
Depends	R (>= 2.10)
Imports	Biostrings, IRanges, seqLogo, parallel, methods, grid, graphics
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