manta
Microbial Assemblage Normalized Transcript Analysis
Bioconductor version: Release (2.12)
Tools for robust comparative metatranscriptomics.
Author: Ginger Armbrust, Adrian Marchetti, David M. Schruth
Maintainer: Chris Berthiaume <chrisbee at uw.edu>, Adrian Marchetti <amarchetti at unc.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("manta")
To cite this package in a publication, start R and enter:
citation("manta")
Documentation
| R Script | manta | |
| Reference Manual | ||
| Text | NEWS | |
| Text | LICENSE |
Details
| biocViews | Bioinformatics, DataImport, DifferentialExpression, GeneExpression, Genetics, HighThroughputSequencing, QualityControl, RNAseq, Software, Visualization |
| Version | 1.6.1 |
| In Bioconductor since | BioC 2.10 (R-2.15) |
| License | Artistic-2.0 |
| Depends | R (>= 1.8.0), methods, edgeR(>= 2.5.13) |
| Imports | Hmisc |
| Suggests | RSQLite, plotrix |
| System Requirements | |
| URL | http://manta.ocean.washington.edu/ |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | manta_1.6.1.tar.gz |
| Windows Binary | manta_1.6.1.zip (32- & 64-bit) |
| Mac OS X 10.6 (Snow Leopard) | manta_1.6.1.tgz |
| Package Downloads Report | Download Stats |
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