NCIgraph

Pathways from the NCI Pathways Database

Bioconductor version: Release (2.12)

Provides various methods to load the pathways from the NCI Pathways Database in R graph objects and to re-format them.

Author: Laurent Jacob

Maintainer: Laurent Jacob <laurent.jacob at gmail.com>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("NCIgraph")

To cite this package in a publication, start R and enter:

    citation("NCIgraph")

PDF	R Script	NCIgraph: networks from the NCI pathway integrated database as graphNEL objects.
PDF		Reference Manual

biocViews	GraphsAndNetworks, Pathways, Software
Version	1.8.0
In Bioconductor since	BioC 2.8 (R-2.13)
License	GPL-3
Depends	graph, R (>= 2.10.0)
Imports	graph, KEGGgraph, methods, RBGL, RCytoscape, R.methodsS3
Suggests	Rgraphviz
System Requirements
URL
Depends On Me
Imports Me	DEGraph
Suggests Me	DEGraph

Common Bioconductor workflows include:

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!