parser for netCDF, mzXML, mzData and mzML files (mass spectrometry data)


[Up] [Top]

Documentation for package ‘mzR’ version 1.6.3

Help Pages

mzR-package parser for mzXML, mzData and mzML files (mass spectrometry data)
analyzer Access the metadata from an 'mzR' object.
analyzer-method Class 'mzR' and sub-classes
class:mzR Class 'mzR' and sub-classes
class:mzRnetCDF Class 'mzR' and sub-classes
class:mzRramp Class 'mzR' and sub-classes
close Class 'mzR' and sub-classes
close-method Class 'mzR' and sub-classes
detector Access the metadata from an 'mzR' object.
detector-method Class 'mzR' and sub-classes
fileName Create and check mzR objects from netCDF, mzXML, mzData or mzML files.
fileName-method Class 'mzR' and sub-classes
get3Dmap Access the raw data from an 'mzR' object.
get3Dmap-method Class 'mzR' and sub-classes
header Access the raw data from an 'mzR' object.
header-method Class 'mzR' and sub-classes
initializeRamp Create and check mzR objects from netCDF, mzXML, mzData or mzML files.
initializeRamp-method Class 'mzR' and sub-classes
instrumentInfo Access the metadata from an 'mzR' object.
instrumentInfo-method Class 'mzR' and sub-classes
ionisation Access the metadata from an 'mzR' object.
ionisation-method Class 'mzR' and sub-classes
isInitialized Create and check mzR objects from netCDF, mzXML, mzData or mzML files.
isInitialized-method Class 'mzR' and sub-classes
length Class 'mzR' and sub-classes
length-method Class 'mzR' and sub-classes
manufacturer Access the metadata from an 'mzR' object.
manufacturer-method Class 'mzR' and sub-classes
model Access the metadata from an 'mzR' object.
model-method Class 'mzR' and sub-classes
mzR parser for mzXML, mzData and mzML files (mass spectrometry data)
mzR-class Class 'mzR' and sub-classes
mzRnetCDF-class Class 'mzR' and sub-classes
mzRramp-class Class 'mzR' and sub-classes
openMSfile Create and check mzR objects from netCDF, mzXML, mzData or mzML files.
peaks Access the raw data from an 'mzR' object.
peaks-method Class 'mzR' and sub-classes
peaksCount Access the raw data from an 'mzR' object.
peaksCount-method Class 'mzR' and sub-classes
runInfo Access the metadata from an 'mzR' object.
runInfo-method Class 'mzR' and sub-classes