advanced | VEPParam objects |
advanced<- | VEPParam objects |
advancedOpts | VEPParam objects |
basic | VEPParam objects |
basic<- | VEPParam objects |
basicOpts | VEPParam objects |
cache | VEPParam objects |
cache<- | VEPParam objects |
cacheOpts | VEPParam objects |
class:VEPParam | VEPParam objects |
colocatedVariants | VEPParam objects |
colocatedVariants<- | VEPParam objects |
colocatedVariantsOpts | VEPParam objects |
database | VEPParam objects |
database<- | VEPParam objects |
databaseOpts | VEPParam objects |
dataformat | VEPParam objects |
dataformat<- | VEPParam objects |
dataformatOpts | VEPParam objects |
ensemblVEP | Query Ensembl Variant Effect Predictor |
ensemblVEP-method | Query Ensembl Variant Effect Predictor |
filterqc | VEPParam objects |
filterqc<- | VEPParam objects |
filterqcOpts | VEPParam objects |
identifier | VEPParam objects |
identifier<- | VEPParam objects |
identifierOpts | VEPParam objects |
input | VEPParam objects |
input<- | VEPParam objects |
inputOpts | VEPParam objects |
output | VEPParam objects |
output<- | VEPParam objects |
outputOpts | VEPParam objects |
parseCSQToGRanges | Parse the CSQ column of a VCF object into a GRanges object |
parseCSQToGRanges-method | Parse the CSQ column of a VCF object into a GRanges object |
show-method | VEPParam objects |
VEPParam | VEPParam objects |
VEPParam-class | VEPParam objects |