GeneGroupAnalysis-package |
The Gene Group Analysis package for Gene Functional Class Analysis. |
ArrayInfoFun |
Function that extracts the required information from the data set. |
GeneGroupAnalysis |
The Gene Group Analysis package for Gene Functional Class Analysis. |
GeneGrps2AffyGrpsFun |
Function that translates GO hierarchical tree of gene symbols to a groups of Affymetrix identifiers of interest. |
GeneMaxVarFun |
Function to compute the Affymetrix identifiers with the maximum variability between phenotypes. |
GGAdata |
List containing a collection of gene symbols with their associated GO term and GO hierarchical trees for each ontology |
GibbsAllFun.ts |
Function to compute the Gibb's sampler for the series data design. |
GibbsFun.cs |
Function to compute the Gibb's sampler for the cross-sectional data design. |
GibbsNPFun.ts |
Function to compute the Gibb's sampler for the series data design. |
MCMCData.cs |
Function that computes the required data set objects for the Gibb's sampler under a cross-sectional data design. |
MCMCData.ts |
Function that computes the required data set objects for the Gibb's sampler under a time series data design. |
SizeGOAffyGrps |
Function to compute gene functional classes with a desired size. |