GE CodeLink Rat Whole Genome Bioarray (~34 000 rat gene targets) annotation data (chip rwgcod)

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Documentation for package ‘rwgcod.db’ version 2.14.0

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rwgcod Bioconductor annotation data package
rwgcod.db Bioconductor annotation data package
rwgcodACCNUM Map Manufacturer identifiers to Accession Numbers
rwgcodALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
rwgcodCHR Map Manufacturer IDs to Chromosomes
rwgcodCHRLENGTHS A named vector for the length of each of the chromosomes
rwgcodCHRLOC Map Manufacturer IDs to Chromosomal Location
rwgcodCHRLOCEND Map Manufacturer IDs to Chromosomal Location
rwgcodENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
rwgcodENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
rwgcodENTREZID Map between Manufacturer Identifiers and Entrez Gene
rwgcodENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
rwgcodENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
rwgcodGENENAME Map between Manufacturer IDs and Genes
rwgcodGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
rwgcodGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
rwgcodGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
rwgcodLOCUSID Map between Manufacturer Identifiers and Entrez Gene
rwgcodMAPCOUNTS Number of mapped keys for the maps in package rwgcod.db
rwgcodORGANISM The Organism information for rwgcod
rwgcodORGPKG The Organism information for rwgcod
rwgcodPATH Mappings between probe identifiers and KEGG pathway identifiers
rwgcodPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
rwgcodPFAM Map Manufacturer IDs to Pfam IDs
rwgcodPMID Maps between Manufacturer Identifiers and PubMed Identifiers
rwgcodPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
rwgcodPROSITE Map Manufacturer IDs to PROSITE ID
rwgcodREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
rwgcodSYMBOL Map between Manufacturer Identifiers and Gene Symbols
rwgcodUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
rwgcodUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
rwgcodUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
rwgcod_dbconn Collect information about the package annotation DB
rwgcod_dbfile Collect information about the package annotation DB
rwgcod_dbInfo Collect information about the package annotation DB
rwgcod_dbschema Collect information about the package annotation DB