GE CodeLink Mouse Whole Genome Bioarray (~36 000 mouse gene targets) annotation data (chip mwgcod)

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Documentation for package ‘mwgcod.db’ version 2.14.0

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mwgcod Bioconductor annotation data package
mwgcod.db Bioconductor annotation data package
mwgcodACCNUM Map Manufacturer identifiers to Accession Numbers
mwgcodALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
mwgcodCHR Map Manufacturer IDs to Chromosomes
mwgcodCHRLENGTHS A named vector for the length of each of the chromosomes
mwgcodCHRLOC Map Manufacturer IDs to Chromosomal Location
mwgcodCHRLOCEND Map Manufacturer IDs to Chromosomal Location
mwgcodENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
mwgcodENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
mwgcodENTREZID Map between Manufacturer Identifiers and Entrez Gene
mwgcodENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
mwgcodENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
mwgcodGENENAME Map between Manufacturer IDs and Genes
mwgcodGO Maps between manufacturer IDs and Gene Ontology (GO) IDs
mwgcodGO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
mwgcodGO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
mwgcodLOCUSID Map between Manufacturer Identifiers and Entrez Gene
mwgcodMAPCOUNTS Number of mapped keys for the maps in package mwgcod.db
mwgcodMGI Map MGI gene accession numbers with manufacturer identifiers
mwgcodMGI2PROBE Map MGI gene accession numbers with manufacturer identifiers
mwgcodORGANISM The Organism information for mwgcod
mwgcodORGPKG The Organism information for mwgcod
mwgcodPATH Mappings between probe identifiers and KEGG pathway identifiers
mwgcodPATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
mwgcodPFAM Map Manufacturer IDs to Pfam IDs
mwgcodPMID Maps between Manufacturer Identifiers and PubMed Identifiers
mwgcodPMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
mwgcodPROSITE Map Manufacturer IDs to PROSITE ID
mwgcodREFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
mwgcodSYMBOL Map between Manufacturer Identifiers and Gene Symbols
mwgcodUNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
mwgcodUNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
mwgcodUNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
mwgcod_dbconn Collect information about the package annotation DB
mwgcod_dbfile Collect information about the package annotation DB
mwgcod_dbInfo Collect information about the package annotation DB
mwgcod_dbschema Collect information about the package annotation DB