Illumina MouseWG6v1 annotation data (chip illuminaMousev1)


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Documentation for package ‘illuminaMousev1.db’ version 1.16.1

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illuminaMousev1 Bioconductor annotation data package
illuminaMousev1.db Bioconductor annotation data package
illuminaMousev1ACCNUM Map Manufacturer identifiers to Accession Numbers
illuminaMousev1ALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
illuminaMousev1ARRAYADDRESS Custom mappings added to the package
illuminaMousev1CHR Map Manufacturer IDs to Chromosomes
illuminaMousev1CHRLENGTHS A named vector for the length of each of the chromosomes
illuminaMousev1CHRLOC Map Manufacturer IDs to Chromosomal Location
illuminaMousev1CHRLOCEND Map Manufacturer IDs to Chromosomal Location
illuminaMousev1CODINGZONE Custom mappings added to the package
illuminaMousev1ENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
illuminaMousev1ENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
illuminaMousev1ENSEMBLREANNOTATED Custom mappings added to the package
illuminaMousev1ENTREZID Map between Manufacturer Identifiers and Entrez Gene
illuminaMousev1ENTREZREANNOTATED Custom mappings added to the package
illuminaMousev1ENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
illuminaMousev1ENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
illuminaMousev1fullReannotation Custom mappings added to the package
illuminaMousev1GENENAME Map between Manufacturer IDs and Genes
illuminaMousev1GENOMICLOCATION Custom mappings added to the package
illuminaMousev1GENOMICMATCHSIMILARITY Custom mappings added to the package
illuminaMousev1GO Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaMousev1GO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaMousev1GO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
illuminaMousev1listNewMappings Custom mappings added to the package
illuminaMousev1LOCUSID Map between Manufacturer Identifiers and Entrez Gene
illuminaMousev1MAPCOUNTS Number of mapped keys for the maps in package illuminaMousev1.db
illuminaMousev1MGI Map MGI gene accession numbers with manufacturer identifiers
illuminaMousev1MGI2PROBE Map MGI gene accession numbers with manufacturer identifiers
illuminaMousev1NUID Custom mappings added to the package
illuminaMousev1ORGANISM The Organism information for illuminaMousev1
illuminaMousev1ORGPKG The Organism information for illuminaMousev1
illuminaMousev1OTHERGENOMICMATCHES Custom mappings added to the package
illuminaMousev1OVERLAPPINGSNP Custom mappings added to the package
illuminaMousev1PATH Mappings between probe identifiers and KEGG pathway identifiers
illuminaMousev1PATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
illuminaMousev1PFAM Map Manufacturer IDs to Pfam IDs
illuminaMousev1PMID Maps between Manufacturer Identifiers and PubMed Identifiers
illuminaMousev1PMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
illuminaMousev1PROBEQUALITY Custom mappings added to the package
illuminaMousev1PROBESEQUENCE Custom mappings added to the package
illuminaMousev1PROSITE Map Manufacturer IDs to PROSITE ID
illuminaMousev1REFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
illuminaMousev1REPEATMASK Custom mappings added to the package
illuminaMousev1REPORTERGROUPID Custom mappings added to the package
illuminaMousev1REPORTERGROUPNAME Custom mappings added to the package
illuminaMousev1SECONDMATCHES Custom mappings added to the package
illuminaMousev1SECONDMATCHSIMILARITY Custom mappings added to the package
illuminaMousev1SYMBOL Map between Manufacturer Identifiers and Gene Symbols
illuminaMousev1SYMBOLREANNOTATED Custom mappings added to the package
illuminaMousev1TRANSCRIPTOMICMATCHSIMILARITY Custom mappings added to the package
illuminaMousev1UNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
illuminaMousev1UNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
illuminaMousev1UNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
illuminaMousev1_dbconn Collect information about the package annotation DB
illuminaMousev1_dbfile Collect information about the package annotation DB
illuminaMousev1_dbInfo Collect information about the package annotation DB
illuminaMousev1_dbschema Collect information about the package annotation DB