FHCRC Nelson Lab OperonHumanV3 Annotation Data (OperonHumanV3)

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Documentation for package ‘OperonHumanV3.db’ version 2.8.0

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OperonHumanV3 Bioconductor annotation data package
OperonHumanV3.db Bioconductor annotation data package
OperonHumanV3ACCNUM Map Manufacturer identifiers to Accession Numbers
OperonHumanV3ALIAS2PROBE Map between Common Gene Symbol Identifiers and Manufacturer Identifiers
OperonHumanV3CHR Map Manufacturer IDs to Chromosomes
OperonHumanV3CHRLENGTHS A named vector for the length of each of the chromosomes
OperonHumanV3CHRLOC Map Manufacturer IDs to Chromosomal Location
OperonHumanV3CHRLOCEND Map Manufacturer IDs to Chromosomal Location
OperonHumanV3ENSEMBL Map Ensembl gene accession numbers with Entrez Gene identifiers
OperonHumanV3ENSEMBL2PROBE Map Ensembl gene accession numbers with Entrez Gene identifiers
OperonHumanV3ENTREZID Map between Manufacturer Identifiers and Entrez Gene
OperonHumanV3ENZYME Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
OperonHumanV3ENZYME2PROBE Maps between Manufacturer IDs and Enzyme Commission (EC) Numbers
OperonHumanV3GENENAME Map between Manufacturer IDs and Genes
OperonHumanV3GO Maps between manufacturer IDs and Gene Ontology (GO) IDs
OperonHumanV3GO2ALLPROBES Maps between manufacturer IDs and Gene Ontology (GO) IDs
OperonHumanV3GO2PROBE Maps between manufacturer IDs and Gene Ontology (GO) IDs
OperonHumanV3LOCUSID Map between Manufacturer Identifiers and Entrez Gene
OperonHumanV3MAP Map between Manufacturer Identifiers and cytogenetic maps/bands
OperonHumanV3MAPCOUNTS Number of mapped keys for the maps in package OperonHumanV3.db
OperonHumanV3OMIM Map between Manufacturer Identifiers and Mendelian Inheritance in Man (MIM) identifiers
OperonHumanV3ORGANISM The Organism information for OperonHumanV3
OperonHumanV3ORGPKG The Organism information for OperonHumanV3
OperonHumanV3PATH Mappings between probe identifiers and KEGG pathway identifiers
OperonHumanV3PATH2PROBE Mappings between probe identifiers and KEGG pathway identifiers
OperonHumanV3PFAM Map Manufacturer IDs to Pfam IDs
OperonHumanV3PMID Maps between Manufacturer Identifiers and PubMed Identifiers
OperonHumanV3PMID2PROBE Maps between Manufacturer Identifiers and PubMed Identifiers
OperonHumanV3PROSITE Map Manufacturer IDs to PROSITE ID
OperonHumanV3REFSEQ Map between Manufacturer Identifiers and RefSeq Identifiers
OperonHumanV3SYMBOL Map between Manufacturer Identifiers and Gene Symbols
OperonHumanV3UNIGENE Map between Manufacturer Identifiers and UniGene cluster identifiers
OperonHumanV3UNIPROT Map Uniprot accession numbers with Entrez Gene identifiers
OperonHumanV3UNIPROT2PROBE Map Uniprot accession numbers with Entrez Gene identifiers
OperonHumanV3_dbconn Collect information about the package annotation DB
OperonHumanV3_dbfile Collect information about the package annotation DB
OperonHumanV3_dbInfo Collect information about the package annotation DB
OperonHumanV3_dbschema Collect information about the package annotation DB