Affymetrix expression data quality control and reproducibility analysis

Bioconductor version: Release (2.11)

Quality control of Affymetrix GeneChip expression data and reproducibility analysis of human whole genome chips with the MAQC reference datasets.

Author: Laurent Gatto

Maintainer: Laurent Gatto <laurent.gatto at gmail.com>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script yaqcaffy: Affymetrix quality control and MAQC reproducibility
PDF   Reference Manual
Text   NEWS


biocViews Microarray,OneChannel,QualityControl,ReportWriting, Software
Version 1.18.0
In Bioconductor since BioC 2.2 (R-2.7)
License Artistic-2.0
Depends simpleaffy(>= 2.19.3), methods
Imports stats4
Suggests MAQCsubsetAFX, affydata, xtable, tcltk2, tcltk
System Requirements
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source yaqcaffy_1.18.0.tar.gz
Windows Binary yaqcaffy_1.18.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) yaqcaffy_1.18.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center