survcomp

Performance Assessment and Comparison for Survival Analysis

Bioconductor version: Release (2.11)

R package providing functions to assess and to compare the performance of risk prediction (survival) models.

Author: Benjamin Haibe-Kains, Markus Schroeder, Catharina Olsen, Christos Sotiriou, Gianluca Bontempi, John Quackenbush

Maintainer: Benjamin Haibe-Kains <bhaibeka at jimmy.harvard.edu>, Markus Schroeder <mschroed at jimmy.harvard.edu>, Catharina Olsen <colsen at ulb.ac.be>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("survcomp")

To cite this package in a publication, start R and enter:

    citation("survcomp")

Documentation

PDF	R Script	SurvComp: a package for performance assessment and comparison for survival analysis
PDF		Reference Manual

Details

biocViews	DifferentialExpression, GeneExpression, Software, Visualization
Version	1.8.1
In Bioconductor since	BioC 2.8 (R-2.13)
License	Artistic-2.0
Depends	R (>= 2.10), survival, prodlim
Imports	ipred, SuppDists, KernSmooth, survivalROC, bootstrap, grid, rmeta
Suggests	Hmisc, CPE, clinfun, survJamda, Biobase, xtable
System Requirements
URL	http://compbio.dfci.harvard.edu
Depends On Me	genefu
Imports Me
Suggests Me	breastCancerMAINZ, breastCancerNKI, breastCancerTRANSBIG, breastCancerUNT, breastCancerUPP, breastCancerVDX

Package Downloads

Package Source	survcomp_1.8.1.tar.gz
Windows Binary	survcomp_1.8.1.zip (32- & 64-bit)
MacOS 10.5 (Leopard)	survcomp_1.8.1.tgz
Package Downloads Report	Download Stats

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