lapmix

Laplace Mixture Model in Microarray Experiments

Bioconductor version: Release (2.11)

Laplace mixture modelling of microarray experiments. A hierarchical Bayesian approach is used, and the hyperparameters are estimated using empirical Bayes. The main purpose is to identify differentially expressed genes.

Author: Yann Ruffieux, contributions from Debjani Bhowmick, Anthony C. Davison, and Darlene R. Goldstein

Maintainer: Yann Ruffieux <yann.ruffieux at epfl.ch>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("lapmix")

To cite this package in a publication, start R and enter:

    citation("lapmix")

Documentation

PDF R Script lapmix example
PDF   Reference Manual

Details

biocViews Bioinformatics, DifferentialExpression, Microarray, OneChannel, Software
Version 1.24.0
In Bioconductor since BioC 1.9 (R-2.4)
License GPL (>= 2)
Depends R (>= 2.6.0),stats
Imports Biobase, graphics, grDevices, methods, stats, tools, utils
Suggests
System Requirements
URL http://www.r-project.org, http://www.bioconductor.org, http://stat.epfl.ch
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source lapmix_1.24.0.tar.gz
Windows Binary lapmix_1.24.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) lapmix_1.24.0.tgz
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