ibh

Interaction Based Homogeneity for Evaluating Gene Lists

Bioconductor version: Release (2.11)

This package contains methods for calculating Interaction Based Homogeneity to evaluate fitness of gene lists to an interaction network which is useful for evaluation of clustering results and gene list analysis. BioGRID interactions are used in the calculation. The user can also provide their own interactions.

Author: Kircicegi Korkmaz, Volkan Atalay, Rengul Cetin Atalay.

Maintainer: Kircicegi Korkmaz <e102771 at ceng.metu.edu.tr>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("ibh")

To cite this package in a publication, start R and enter:

    citation("ibh")

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