iPAC

Identification of Protein Amino acid Clustering

Bioconductor version: Release (2.11)

iPAC is a novel tool to identify somatic amino acid mutation clustering within proteins while taking into account protein structure.

Author: Gregory Ryslik, Hongyu Zhao

Maintainer: Gregory Ryslik <gregory.ryslik at yale.edu>

To install this package, start R and enter:

    source("http://bioconductor.org/biocLite.R")
    biocLite("iPAC")

To cite this package in a publication, start R and enter:

    citation("iPAC")

Documentation

PDF R Script iPAC: identification of Protein Amino acid Mutations
PDF   Reference Manual
Text   NEWS

Details

biocViews Bioinformatics, BiologicalDomains, Clustering, Proteomics, Software
Version 1.0.0
In Bioconductor since BioC 2.11 (R-2.15)
License GPL-2
Depends R(>= 2.15),gdata, scatterplot3d, Biostrings, multtest
Imports
Suggests
System Requirements
URL
Depends On Me
Imports Me
Suggests Me

Package Downloads

Package Source iPAC_1.0.0.tar.gz
Windows Binary iPAC_1.0.0.zip (32- & 64-bit)
MacOS 10.5 (Leopard) iPAC_1.0.0.tgz
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