iASeq
iASeq: integrating multiple sequencing datasets for detecting allele-specific events
Bioconductor version: Release (2.11)
It fits correlation motif model to multiple RNAseq or ChIPseq studies to improve detection of allele-specific events and describe correlation patterns across studies.
Author: Yingying Wei, Hongkai Ji
Maintainer: Yingying Wei <ywei at jhsph.edu>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("iASeq")
To cite this package in a publication, start R and enter:
citation("iASeq")
Documentation
| R Script | iASeq Vignette | |
| Reference Manual |
Details
| biocViews | Bioinformatics, ChIPseq, RNAseq, SNP, Software |
| Version | 1.2.0 |
| In Bioconductor since | BioC 2.10 (R-2.15) |
| License | GPL-2 |
| Depends | R (>= 2.14.1) |
| Imports | graphics, grDevices |
| Suggests | |
| System Requirements | |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me |
Package Downloads
| Package Source | iASeq_1.2.0.tar.gz |
| Windows Binary | iASeq_1.2.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) | iASeq_1.2.0.tgz |
| Package Downloads Report | Download Stats |
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