Operations on genomic intervals

Bioconductor version: Release (2.11)

This package defines classes for representing genomic intervals and provides functions and methods for working with these. Note: The package provides the basic infrastructure for and is enhanced by the package 'girafe'.

Author: Julien Gagneur <gagneur at>, Joern Toedling, Richard Bourgon, Nicolas Delhomme

Maintainer: Julien Gagneur <gagneur at>

To install this package, start R and enter:


To cite this package in a publication, start R and enter:



PDF R Script Overview of the genomeIntervals package.
PDF   Reference Manual


biocViews DataImport, Genetics, Infrastructure, Software
Version 1.14.0
In Bioconductor since BioC 2.4 (R-2.9)
License Artistic-2.0
Depends R (>= 2.15.0), methods, intervals (>= 0.13.3), BiocGenerics(>= 0.3.2)
Imports methods, Biobase
System Requirements
Depends On Me easyRNASeq, girafe, HiTC
Imports Me
Suggests Me RnaSeqTutorial

Package Downloads

Package Source genomeIntervals_1.14.0.tar.gz
Windows Binary (32- & 64-bit)
MacOS 10.5 (Leopard) genomeIntervals_1.14.0.tgz
Package Downloads Report Download Stats

Mailing Lists »

Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!

Fred Hutchinson Cancer Research Center