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| plateCore-package | plateCore: A Bioconductor package for high throughput analysis of flow cytometry data |
| %on% | Methods for Function %on% in Package 'plateCore' |
| %on%-method | Methods for Function %on% in Package 'plateCore' |
| %on%-methods | Methods for Function %on% in Package 'plateCore' |
| applyControlGates | Apply control gates to a flowPlate |
| applyControlGates-method | Apply control gates to a flowPlate |
| applyControlGates-methods | Apply control gates to a flowPlate |
| compensate | Compensate a flowPlate to correct for the effects of spillover. |
| compensate-method | Compensate a flowPlate to correct for the effects of spillover. |
| compensationSet | Sample Compensation Data Set |
| densityplot | One-dimensional density plots for flowPlates |
| densityplot-method | One-dimensional density plots for flowPlates |
| fixAutoFl | Correct for the effects of cell size (FSC) on autofluorescence |
| fixAutoFl-method | Correct for the effects of cell size (FSC) on autofluorescence |
| flowPlate | Create a flowPlate |
| flowPlate-class | The flowPlate class. |
| flowPlate-method | Create a flowPlate |
| fpbind | Merge multiple flowPlates into a single virtual flowPlate |
| fpbind-method | Merge multiple flowPlates into a single virtual flowPlate |
| getGroups | Retrieve Negative control groups from a flowPlate |
| getGroups-method | Retrieve Negative control groups from a flowPlate |
| gutterPlot | gutterPlot |
| gutterPlot-method | gutterPlot |
| mfiPlot | mfiPlot |
| mfiPlot-method | mfiPlot |
| panel.densityplot.flowPlate | Lattice-flowViz style panel function for flowPlate densityplot. |
| panel.xyplot.flowPlate | Lattice-flowViz style panel function for flowPlate xyplot. |
| pbmcPlate | pbmcPlate Data Set |
| phenoData-method | Create a flowPlate |
| plateCore | plateCore: A Bioconductor package for high throughput analysis of flow cytometry data |
| plateSet | Get the flowSet from a flowPlate object |
| plateSet-method | Get the flowSet from a flowPlate object |
| plotPlate | plotPlate |
| plotPlate-method | plotPlate |
| prepanel.densityplot.flowPlate | Lattice-flowViz style panel function for flowPlate densityplot. |
| prepanel.xyplot.flowPlate | Lattice-flowViz style panel function for flowPlate xyplot. |
| sampleNames-method | Create a flowPlate |
| setControlGates | Create control gates for a flowPlate |
| setControlGates-method | Create control gates for a flowPlate |
| Subset | Subset |
| Subset-method | Subset |
| summaryStats | Compute summary statistics on a flowPlate |
| summaryStats-method | Compute summary statistics on a flowPlate |
| wellAnnotation | Retrieve a data.frame describing the content of a flowPlate |
| wellAnnotation-method | Retrieve a data.frame describing the content of a flowPlate |
| xyplot | Scatter plots (dotplots) for flowPlates. |
| xyplot-method | Scatter plots (dotplots) for flowPlates. |
| [-method | The flowPlate class. |
| [[-method | The flowPlate class. |