addData | Create an object of eSet class |
Biodetection | Biodetection class |
Biodetection-class | Biodetection class |
CD | CD class |
CD-class | CD class |
CountsBio | CountsBio class |
CountsBio-class | CountsBio class |
dat | Exploration of expression data. |
dat2save | - |
dat2save-method | Biodetection class |
dat2save-method | CD class |
dat2save-method | CountsBio class |
dat2save-method | DLBio class |
dat2save-method | Saturation class |
DE.plot | Plot to compare expression values for two conditions or to represent differential expression statistics |
degenes | Recover the differencially expressed features |
DLBio | DLBio class |
DLBio-class | DLBio class |
explo.plot | Exploratory plots for sequencing data. |
explo.plot-method | Biodetection class |
explo.plot-method | CD class |
explo.plot-method | CountsBio class |
explo.plot-method | DLBio class |
explo.plot-method | Saturation class |
mybiotypes | Marioni's dataset |
mychroms | Marioni's dataset |
myCounts | Class myCounts |
mycounts | Marioni's dataset |
myCounts-class | Class myCounts |
mydata | Example of objects used and created by the NOISeq package |
myfactors | Marioni's dataset |
mylength | Marioni's dataset |
mynoiseq | Example of objects used and created by the NOISeq package |
noiseq | Differential expression method |
Output | Output class of NOISeq |
Output-class | Output class of NOISeq |
readData | Create an object of eSet class |
rpkm | Normalization methods |
Saturation | Saturation class |
Saturation-class | Saturation class |
show-method | Biodetection class |
show-method | CD class |
show-method | CountsBio class |
show-method | DLBio class |
show-method | Output class of NOISeq |
show-method | Saturation class |
tmm | Normalization methods |
uqua | Normalization methods |