data provided by UCSC for Cd4 raw measures of DnaseI hypersensitivity


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Documentation for package ‘encoDnaseI’ version 0.1.14

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c19g two-panel plot with track info and snp screen t-values
chrnum Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
chrnum-class Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
chrnum-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
chromStarts Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
chromStarts-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
clipTrk Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
clipTrk-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
dataVals Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
dataVals-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
demoPGM1ssr two-panel plot with track info and snp screen t-values
demoTrk19 Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
getTrkXY Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
getTrkXY-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
hg18track-class Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
initialize-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
juxtaPlot two-panel plot with track info and snp screen t-values
makeHg18track Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
rangeLocs Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
rangeLocs-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.
rawCD4 A data frame with information on the UCSC browser track related to DNaseI hypersensitivity
rawCd4DnaseI A data frame with information on the UCSC browser track related to DNaseI hypersensitivity
rawHelaDnaseI A data frame with information on the UCSC browser track related to DNaseI hypersensitivity
sOSR2 two-panel plot with track info and snp screen t-values
[-method Class "hg18track" container for hg18 annotation found in genome browser track files; class "chrnum" extends numeric for an indexing application on hg18track objects.