Bioconductor version: 2.10
SPADE, or Spanning tree Progression of Density normalized Events, is an analysis and visualization tool for high dimensional flow cytometry data that organizes cells into hierarchies of related phenotypes.
Author: M. Linderman, P. Qiu, E. Simonds, Z. Bjornsen
Maintainer: Michael Linderman <michael.d.linderman at gmail.com>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("spade")
To cite this package in a publication, start R and enter:
citation("spade")
R Script | spade package | |
Reference Manual | ||
Text | LICENSE |
biocViews | Clustering, FlowCytometry, GUI, GraphsAndNetworks, Software, Visualization |
Depends | R (>= 2.11), igraph |
Imports | Biobase, flowCore |
Suggests | flowViz |
System Requirements | |
License | GPL-2 |
URL | http://cytospade.org |
Depends On Me | |
Imports Me | |
Suggests Me | |
Version | 1.2.0 |
Package Source | spade_1.2.0.tar.gz |
Windows Binary | spade_1.2.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | spade_1.2.0.tgz |
Package Downloads Report | Download Stats |
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