- Home
- Bioconductor 2.10
- Software Packages
- motifRG
motifRG
A package for discriminative motif discovery, designed for high throughput sequencing dataset
Bioconductor version: 2.10
Tools for discriminative motif discovery using regression methods
Author: Zizhen Yao
Maintainer: Zizhen Yao <yzizhen at fhcrc.org>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("motifRG")
To cite this package in a publication, start R and enter:
citation("motifRG")
Documentation
| R Script | motifRG: regression-based discriminative motif discovery | |
| Reference Manual |
Details
| biocViews | Software, Transcription |
| Depends | R (>= 2.10) |
| Imports | Biostrings, IRanges, seqLogo, parallel, methods, grid,graphics |
| Suggests | |
| System Requirements | |
| License | Artistic-2.0 |
| URL | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Version | 1.0.0 |
| Since | Bioconductor 2.10 (R-2.15) |
Package Downloads
| Package Source | motifRG_1.0.0.tar.gz |
| Windows Binary | motifRG_1.0.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | motifRG_1.0.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
Post questions about Bioconductor packages to our mailing lists. Read the posting guide before posting!
Contact us: webmaster@bioconductor.org
Hosting provided by Fred Hutchinson Cancer Research Center
Copyright © 2003 - 2012
