Bioconductor version: 2.10
Functions for handling data from Bioconductor Affymetrix annotation data packages. Produces compact HTML and text reports including experimental data and URL links to many online databases. Allows searching biological metadata using various criteria.
Author: Colin A. Smith <annaffy at colinsmith.org>
Maintainer: Colin A. Smith <annaffy at colinsmith.org>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("annaffy")
To cite this package in a publication, start R and enter:
citation("annaffy")
R Script | annaffy Primer | |
Reference Manual |
biocViews | Annotation, GO, Microarray, OneChannel, Pathways, ReportWriting, Software |
Depends | R (>= 2.5.0), methods, Biobase, GO.db, KEGG.db |
Imports | AnnotationDbi(>= 0.1.15) |
Suggests | hgu95av2.db, multtest, tcltk |
System Requirements | |
License | LGPL |
URL | |
Depends On Me | a4Base, a4Reporting, PGSEA, webbioc |
Imports Me | affycoretools |
Suggests Me | AffyExpress, ArrayTools, BiocCaseStudies, maDB |
Version | 1.28.0 |
Since | Bioconductor 1.6 (R-2.1) or earlier |
Package Source | annaffy_1.28.0.tar.gz |
Windows Binary | annaffy_1.28.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | annaffy_1.28.0.tgz |
Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
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