Bioconductor version: 2.10
affyILM is a preprocessing tool which estimates gene expression levels for Affymetrix Gene Chips. Input from physical chemistry is employed to first background subtract intensities before calculating concentrations on behalf of the Langmuir model.
Author: K. Myriam Kroll, Fabrice Berger, Gerard Barkema, Enrico Carlon
Maintainer: Myriam Kroll and Fabrice Berger <fabrice.berger at gmail.com>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R") biocLite("affyILM")
To cite this package in a publication, start R and enter:
citation("affyILM")
R Script | affyILM1.3.0 | |
Reference Manual |
biocViews | Microarray, OneChannel, Preprocessing, Software |
Depends | R (>= 2.10.0), methods, gcrma |
Imports | affxparser(>= 1.16.0), affy, graphics, methods, Biobase |
Suggests | AffymetrixDataTestFiles |
System Requirements | |
License | GPL version 3 |
URL | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Version | 1.8.0 |
Since | Bioconductor 2.6 (R-2.11) |
Package Source | affyILM_1.8.0.tar.gz |
Windows Binary | affyILM_1.8.0.zip (32- & 64-bit) |
MacOS 10.5 (Leopard) binary | affyILM_1.8.0.tgz |
Package Downloads Report | Download Stats |
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