ScISI
In Silico Interactome
Bioconductor version: 2.10
Package to create In Silico Interactomes
Author: Tony Chiang <tchiang at fhcrc.org>
Maintainer: Tony Chiang <tchiang at fhcrc.org>
To install this package, start R and enter:
source("http://bioconductor.org/biocLite.R")
biocLite("ScISI")
To cite this package in a publication, start R and enter:
citation("ScISI")
Documentation
| R Script | ScISI Vignette | |
| Reference Manual |
Details
| biocViews | GraphsAndNetworks, Proteomics, Software |
| Depends | R (>= 2.10), GO.db, RpsiXML, annotate, apComplex |
| Imports | AnnotationDbi, GO.db, RpsiXML, annotate, methods, org.Sc.sgd.db, utils |
| Suggests | ppiData, xtable |
| System Requirements | |
| License | LGPL |
| URL | |
| Depends On Me | PCpheno, ppiStats, SLGI |
| Imports Me | PCpheno, SLGI |
| Suggests Me | RpsiXML |
| Version | 1.28.0 |
| Since | Bioconductor 1.8 (R-2.3) |
Package Downloads
| Package Source | ScISI_1.28.0.tar.gz |
| Windows Binary | ScISI_1.28.0.zip (32- & 64-bit) |
| MacOS 10.5 (Leopard) binary | ScISI_1.28.0.tgz |
| Package Downloads Report | Download Stats |
Common Bioconductor workflows include:
- Oligonucleotide Arrays
- High-throughput Sequencing
- Annotation
- Variants
- Flow Cytometry and other assays
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